Flagship Pioneering, Inc. careers
90 open roles at Flagship Pioneering, Inc., updated daily from their career page. Hiring in Cambridge, Watertown, Somerville, Boston, Boulder. Listed pay runs around $155k–$231k.
Flagship Pioneering, Inc. has about 90 open roles right now spread across dozens of teams and almost entirely onsite. Where pay is listed, it runs about $155k–$231k.
Almost all of these roles are onsite.
24 of these roles were posted in the last 30 days.
Hiring across these teams
Research/Discovery26Artificial Intelligence16Legal7IT5Computational & Data Sciences5Accounting & Finance4Origination3G&A3
Median pay by team at Flagship Pioneering, Inc.
| Team | Roles | Median pay |
|---|---|---|
| Artificial Intelligence | 16 | $192k–$259k |
| Legal | 7 | $172k–$237k |
| Computational & Data Sciences | 5 | $165k–$209k |
| Research/Discovery | 25 | $126k–$182k |
| IT | 5 | $128k–$176k |
Median base salary only (excludes equity and bonus), from current Flagship Pioneering, Inc. postings that disclose pay, by team. Teams with too few salaried roles are omitted.
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- Senior Director, LNP Formulation & Process DevelopmentFlagship Pioneering, Inc. · Cambridge, MA USA$213,000 – $280,5003 days ago
- Associate Director, LNP ManufacturingFlagship Pioneering, Inc. · Cambridge, MA USA$154,000 – $203,5003 days ago
- Director/Senior Director, Computational ChemistryFlagship Pioneering, Inc. · Cambridge, MA USA$176,000 – $294,3003 days ago
- Research Associate I/II, Cloning/IVT (Contract)Flagship Pioneering, Inc. · Cambridge, MA USA$31 – $45/hr3 days ago
- Commercial & Go To Market LeadFlagship Pioneering, Inc. · Cambridge, MA USA$150,000 – $200,0004 days ago
- Lead Engineer, Microsoft 365 and Identity AutomationFlagship Pioneering, Inc. · Cambridge, MA USA$128,000 – $176,0005 days ago
- Senior Software Engineer (Backend)Flagship Pioneering, Inc. · Cambridge, MA USA$108,000 – $186,0006 days ago
- Associate Director, AccountingFlagship Pioneering, Inc. · Watertown, MA USA6 days ago
- Origination AssociateFlagship Pioneering, Inc. · Cambridge, MA USA12 days ago
- Research Associate II, Protein SciencesFlagship Pioneering, Inc. · Cambridge, MA USA$74,000 – $93,50013 days ago
- Senior / Principal Data Infrastructure EngineerFlagship Pioneering, Inc. · Cambridge, MA USA$165,000 – $209,00017 days ago
- Scientist I, In Vitro PharmacologyFlagship Pioneering, Inc. · Watertown, MA USA$100,000 – $126,50018 days ago
- Senior Scientist, Bioanalytical SciencesFlagship Pioneering, Inc. · Cambridge, MA USA$126,000 – $181,50018 days ago
- Research Associate, Protein ProductionFlagship Pioneering, Inc. · Cambridge, MA USA$65,000 – $93,50019 days ago
- Senior Associate, Origination - Agriculture and SustainabilityFlagship Pioneering, Inc. · Cambridge, MA USA$155,000 – $210,00020 days ago
- Product Concept Innovation AssociateFlagship Pioneering, Inc. · Cambridge, MA USA$140,000 – $170,00020 days ago
- (Senior) Scientist, Translational BiologyFlagship Pioneering, Inc. · Cambridge, MA USA$126,000 – $165,00023 days ago
- Senior / Principal Scientist, Molecular SimulationsFlagship Pioneering, Inc. · Cambridge, MA USA$146,000 – $236,50024 days ago
- 2027 Flagship Pioneering FellowshipFlagship Pioneering, Inc. · Cambridge, MA USA24 days ago
- Research Associate, In VivoFlagship Pioneering, Inc. · Cambridge, MA USA$65,000 – $93,50026 days ago
- Laboratory Operations AssociateFlagship Pioneering, Inc. · Cambridge, MA USA$72,000 – $99,00026 days ago
- Office ManagerFlagship Pioneering, Inc. · Cambridge, MA USA$60,000 – $82,50026 days ago
- Senior Analyst, Drug Development & Clinical StrategyFlagship Pioneering, Inc. · Cambridge, MA USA$112,000 – $154,55027 days ago
- Head of ProductFlagship Pioneering, Inc. · Cambridge, MA USA$213,000 – $280,50027 days ago
- Principal AI Scientist, Autonomous DiscoveryFlagship Pioneering, Inc. · Cambridge, MA USA$208,000 – $286,0001 month ago
- Senior Director / Vice President, Machine Learning (Generative Chemistry)Flagship Pioneering, Inc. · Cambridge, MA USA$279,000 – $412,5001 month ago
- Director, Research OperationsFlagship Pioneering, Inc. · Watertown, MA USA$179,000 – $235,6001 month ago
- Lead Bioinformatics EngineerFlagship Pioneering, Inc. · Cambridge, MA USA$128,000 – $176,0001 month ago
- Director, Scientific Cloud EngineeringFlagship Pioneering, Inc. · Cambridge, MA USA$172,000 – $236,5001 month ago
- Senior Research Associate, Histology (Contract)Flagship Pioneering, Inc. · Cambridge, MA USA$38 – $51/hr1 month ago
- Senior Scientist, Small Molecule ScreeningFlagship Pioneering, Inc. · Cambridge, MA USA$126,000 – $181,5001 month ago
- Vice President, Translational BiologyFlagship Pioneering, Inc. · Cambridge, MA USA$290,000 – $320,0001 month ago
- Sr. Director, Clinical OperationsFlagship Pioneering, Inc. · Somerville, MA USA$213,000 – $280,0001 month ago
- Director, Corporate StrategyFlagship Pioneering, Inc. · Cambridge, MA USA$183,000 – $231,0001 month ago
- FL114: Senior Scientist, Therapeutics EngineeringFlagship Pioneering, Inc. · Cambridge, MA USA$126,000 – $159,5001 month ago
- Director, Program Lead – Women’s Health and PreeclampsiaFlagship Pioneering, Inc. · Boston, MA USA$179,000 – $236,5001 month ago
- Senior Research Associate, In Vivo PharmacologyFlagship Pioneering, Inc. · Watertown, MA USA$81,000 – $107,2501 month ago
- Director, Health Data ScienceFlagship Pioneering, Inc. · Cambridge, MA USA$192,000 – $253,0001 month ago
- Vice President, AI Research and Real-World EvidenceFlagship Pioneering, Inc. · Cambridge, MA USA$263,000 – $346,5001 month ago
- Associate Director/Director International Accounting and Government ComplianceFlagship Pioneering, Inc. · Cambridge, MA USA$148,000 – $236,5001 month ago
- Sr. Research Systems AnalystFlagship Pioneering, Inc. · Cambridge, MA USA$108,000 – $148,0001 month ago
- Research Associate I/II, Bioprocess DevelopmentFlagship Pioneering, Inc. · Cambridge, MA USA$65,000 – $93,5001 month ago
- Research Associate I/II, Formulation & Process DevelopmentFlagship Pioneering, Inc. · Cambridge, MA USA$65,000 – $93,5001 month ago
- Senior Director, Business DevelopmentFlagship Pioneering, Inc. · Cambridge, MA USA$217,000 – $275,0001 month ago
- Pioneering Medicines: Medical Director / Senior Medical Director, Clinical Development LeadFlagship Pioneering, Inc. · Cambridge, MA USA$215,000 – $335,0001 month ago
- Lead Data EngineerFlagship Pioneering, Inc. · Cambridge, MA USA$128,000 – $176,0001 month ago
- Director, Legal ComplianceFlagship Pioneering, Inc. · Cambridge, MA USA$172,000 – $236,5001 month ago
- Director/Senior Director, Regulatory CounselFlagship Pioneering, Inc. · Cambridge, MA USA$172,000 – $280,5001 month ago
- Vice President, Business DevelopmentFlagship Pioneering, Inc. · Cambridge, MA USA$280,000 – $330,5001 month ago
- Senior Research Associate, LNP ProductionFlagship Pioneering, Inc. · Cambridge, MA USA$81,000 – $107,3002 months ago
- Senior Scientist, Analytical Development and Quality ControlFlagship Pioneering, Inc. · Cambridge, MA USA$126,000 – $181,5002 months ago
- Senior / Principal Computational BiologistFlagship Pioneering, Inc. · Somerville, MA USA$179,000 – $236,0002 months ago
- Director, PharmacologyFlagship Pioneering, Inc. · Somerville, MA USA$180,000 – $248,0002 months ago
- Manager/Senior Manager, Legal Technology and AIFlagship Pioneering, Inc. · Cambridge, MA USA$108,000 – $176,0002 months ago
- Senior Manager, Internal CommunicationsFlagship Pioneering, Inc. · Cambridge, MA USA$128,000 – $176,0002 months ago
- Principal Data ScientistFlagship Pioneering, Inc. · Cambridge, MA USA$179,000 – $236,5002 months ago
- Lead, Product Safety & WellbeingFlagship Pioneering, Inc. · Cambridge, MA USA$138,000 – $181,5002 months ago
- Transactions Counsel, APEXFlagship Pioneering, Inc. · Cambridge, MA USA$128,000 – $235,0002 months ago
- Talent Operations SpecialistFlagship Pioneering, Inc. · Cambridge, MA USA$76,000 – $104,0002 months ago
- Director, Drug Development Project Management & Pipeline StrategyFlagship Pioneering, Inc. · Cambridge, MA USA2 months ago
- Manager, Visual DesignFlagship Pioneering, Inc. · Cambridge, MA USA$108,000 – $148,5002 months ago
- (Senior) Scientist, Optical TechnologiesFlagship Pioneering, Inc. · Cambridge, MA USA$100,000 – $180,0002 months ago
- Strategic Transactions Counsel, APEXFlagship Pioneering, Inc. · Cambridge, MA USA$176,000 – $346,0002 months ago
- Senior Associate, OriginationFlagship Pioneering, Inc. · Cambridge, MA USA$155,000 – $190,0002 months ago
- Senior Electrical Engineer, PCB SystemsFlagship Pioneering, Inc. · Cambridge, MA USA$108,000 – $176,0002 months ago
- Scientist, Computational SensingFlagship Pioneering, Inc. · Cambridge, MA USA$115,000 – $165,0002 months ago
- Principal Scientist, Machine LearningFlagship Pioneering, Inc. · Cambridge, MA USA$208,000 – $286,0002 months ago
- Senior Automation Engineer, Platform BiologyFlagship Pioneering, Inc. · Cambridge, MA USA$108,000 – $170,7002 months ago
- Sr. Director, Alliance and Program ManagementFlagship Pioneering, Inc. · Cambridge, MA USA$217,000 – $275,0002 months ago
- Director, Data & TechnologyFlagship Pioneering, Inc. · Cambridge, MA USA; Durham, NC USA$182,000 – $240,0002 months ago
- Principal / Senior Software EngineerFlagship Pioneering, Inc. · Cambridge, MA USA$108,000 – $209,0002 months ago
- Senior Scientist, Machine LearningFlagship Pioneering, Inc. · Cambridge, MA USA$168,000 – $258,5003 months ago
- Senior Director, Strategy and OperationsFlagship Pioneering, Inc. · Cambridge, MA USA$220,000 – $270,0003 months ago
- (Senior) Scientist - Translational Modeling & Decision ScienceFlagship Pioneering, Inc. · Cambridge, MA USA$115,000 – $205,0003 months ago
- Principal / Senior Principal Scientist, DMPKFlagship Pioneering, Inc. · Cambridge, MA USA$179,000 – $236,0003 months ago
- Principal Scientist, Machine Learning - Multimodal Biological ReasoningFlagship Pioneering, Inc. · Cambridge, MA USA$216,000 – $297,0003 months ago
- Associate Director, Molecular Cloning TechnologiesFlagship Pioneering, Inc. · Cambridge, MA USA$161,000 – $203,5003 months ago
- (Senior) Scientist, Machine LearningFlagship Pioneering, Inc. · Cambridge, MA USA$180,000 – $258,5004 months ago
- Principal Software Engineer - Agentic PlatformFlagship Pioneering, Inc. · Cambridge, MA USA$188,000 – $257,5004 months ago
- Vice President, Human ResourcesFlagship Pioneering, Inc. · Cambridge, MA USA$270,000 – $320,0004 months ago
- Principal Scientist, Machine Learning - BiomoleculesFlagship Pioneering, Inc. · Cambridge, MA USA$208,000 – $286,0004 months ago
- Associate Director FinanceFlagship Pioneering, Inc. · Cambridge, MA USA$148,000 – $203,5004 months ago
- Contracts AttorneyFlagship Pioneering, Inc. · Cambridge, MA USA$138,000 – $236,5004 months ago
- Senior Machine Learning Scientist, Climate & HydrologyFlagship Pioneering, Inc. · Boulder, CO USA; Cambridge, MA USA$127,000 – $205,9005 months ago
- VP, Program Management & Business OperationsFlagship Pioneering, Inc. · Cambridge, MA USA$250,000 – $330,0005 months ago
- Vice President, EngineeringFlagship Pioneering, Inc. · Cambridge, MA USA$313,000 – $400,0005 months ago
- Director, Antibody DiscoveryFlagship Pioneering, Inc. · Cambridge, MA USA$179,000 – $236,5006 months ago
- Vice President, FinanceFlagship Pioneering, Inc. · Cambridge, MA USA$265,000 – $330,0007 months ago
- Senior Strategic Transactions Lead, APEXFlagship Pioneering, Inc. · Cambridge, MA USA$176,000 – $346,0008 months ago
- Operating Principal, Summit PBUFlagship Pioneering, Inc. · Cambridge, MA USA$220,000 – $269,50013 months ago
Common questions
How many open jobs does Flagship Pioneering, Inc. have?
Linora is tracking about 90 open roles at Flagship Pioneering, Inc., refreshed daily from their careers page.
Does Flagship Pioneering, Inc. hire remotely?
Most current Flagship Pioneering, Inc. roles are onsite.
What does Flagship Pioneering, Inc. pay?
Across Flagship Pioneering, Inc. roles that list pay, the range runs about $155k–$231k. Figures come only from postings that disclose salary, so treat them as a guide.
Where is Flagship Pioneering, Inc. hiring?
Recent Flagship Pioneering, Inc. openings are concentrated in Cambridge, Watertown, Somerville, Boston, Boulder.
Updated 2026-10-22. Figures come from live job postings and refresh daily.